WEB-based GEne SeT AnaLysis Toolkit
 
Translating gene lists into biological insights...
 


User data and parameters: User data: textAreaUpload.txt, Organism: hsapiens, Id Type: ensembl_gene_stable_id, Ref Set: entrezgene, Significance Level: Top10, Statistics Test: Hypergeometric, MTC: BH, Minimum: 2

The results for each enriched gene sets are listed in this table.
For each gene set, the first row lists database name, gene set name , and corresponding gene set ID. The second row lists the following statistics:
Finally, genes in the gene set are listed. For each gene, the table lists the user uploaded ID and value (optional), Entrez ID, Ensembl Gene Stable ID, Gene symbol, and description. Ensembl Gene Stable ID and Entrez Gene ID are linked to the Ensembl and Entrez Gene databases, respectively.

Database:Transcription Target       Name:hsa_SCGGAAGY_V$ELK1_02       ID:DB_ID:2413
C=1176; O=5; E=0.76; R=6.55; rawP=0.0009; adjP=0.0140
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000103150 NA MLYCD malonyl-CoA decarboxylase 23417 ENSG00000103150
2  ENSG00000157184 NA CPT2 carnitine palmitoyltransferase 2 1376 ENSG00000157184
3  ENSG00000138092 NA CENPO centromere protein O 79172 ENSG00000138092
4  ENSG00000166821 NA PEX11A peroxisomal biogenesis factor 11 alpha 8800 ENSG00000166821
5  ENSG00000178537 NA SLC25A20 solute carrier family 25 (carnitine/acylcarnitine translocase), member 20 788 ENSG00000178537


Database:Transcription Target       Name:hsa_V$MEF2_03       ID:DB_ID:2008
C=235; O=3; E=0.15; R=19.66; rawP=0.0005; adjP=0.0140
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000132825 NA PPP1R3D protein phosphatase 1, regulatory subunit 3D 5509 ENSG00000132825
2  ENSG00000044446 NA PHKA2 phosphorylase kinase, alpha 2 (liver) 5256 ENSG00000044446
3  ENSG00000162461 NA SLC25A34 solute carrier family 25, member 34 284723 ENSG00000162461


Database:Transcription Target       Name:hsa_V$TGIF_01       ID:DB_ID:2084
C=243; O=2; E=0.16; R=12.68; rawP=0.0109; adjP=0.0256
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000132825 NA PPP1R3D protein phosphatase 1, regulatory subunit 3D 5509 ENSG00000132825
2  ENSG00000171723 NA GPHN gephyrin 10243 ENSG00000171723


Database:Transcription Target       Name:hsa_V$CEBPB_01       ID:DB_ID:1916
C=258; O=2; E=0.17; R=11.94; rawP=0.0122; adjP=0.0256
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000132825 NA PPP1R3D protein phosphatase 1, regulatory subunit 3D 5509 ENSG00000132825
2  ENSG00000167315 NA ACAA2 acetyl-CoA acyltransferase 2 10449 ENSG00000167315


Database:Transcription Target       Name:hsa_GGGCGGR_V$SP1_Q6       ID:DB_ID:2452
C=2891; O=6; E=1.88; R=3.20; rawP=0.0095; adjP=0.0256
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000166575 NA TMEM135 transmembrane protein 135 65084 ENSG00000166575
2  ENSG00000132825 NA PPP1R3D protein phosphatase 1, regulatory subunit 3D 5509 ENSG00000132825
3  ENSG00000171723 NA GPHN gephyrin 10243 ENSG00000171723
4  ENSG00000110090 NA CPT1A carnitine palmitoyltransferase 1A (liver) 1374 ENSG00000110090
5  ENSG00000157184 NA CPT2 carnitine palmitoyltransferase 2 1376 ENSG00000157184
6  ENSG00000178537 NA SLC25A20 solute carrier family 25 (carnitine/acylcarnitine translocase), member 20 788 ENSG00000178537


Database:Transcription Target       Name:hsa_V$MAX_01       ID:DB_ID:1924
C=258; O=2; E=0.17; R=11.94; rawP=0.0122; adjP=0.0256
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000005882 NA PDK2 pyruvate dehydrogenase kinase, isozyme 2 5164 ENSG00000005882
2  ENSG00000110090 NA CPT1A carnitine palmitoyltransferase 1A (liver) 1374 ENSG00000110090


Database:Transcription Target       Name:hsa_V$PPAR_DR1_Q2       ID:DB_ID:2248
C=257; O=2; E=0.17; R=11.99; rawP=0.0121; adjP=0.0256
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000162461 NA SLC25A34 solute carrier family 25, member 34 284723 ENSG00000162461
2  ENSG00000134240 NA HMGCS2 3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial) 3158 ENSG00000134240


Database:Transcription Target       Name:hsa_V$T3R_Q6       ID:DB_ID:2327
C=248; O=2; E=0.16; R=12.42; rawP=0.0113; adjP=0.0256
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000166575 NA TMEM135 transmembrane protein 135 65084 ENSG00000166575
2  ENSG00000005882 NA PDK2 pyruvate dehydrogenase kinase, isozyme 2 5164 ENSG00000005882


Database:Transcription Target       Name:hsa_V$TEF1_Q6       ID:DB_ID:2212
C=222; O=2; E=0.14; R=13.88; rawP=0.0091; adjP=0.0256
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000110090 NA CPT1A carnitine palmitoyltransferase 1A (liver) 1374 ENSG00000110090
2  ENSG00000122483 NA CCDC18 coiled-coil domain containing 18 343099 ENSG00000122483


Database:Transcription Target       Name:hsa_V$NFY_Q6_01       ID:DB_ID:2260
C=261; O=2; E=0.17; R=11.80; rawP=0.0124; adjP=0.0256
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000103150 NA MLYCD malonyl-CoA decarboxylase 23417 ENSG00000103150
2  ENSG00000005882 NA PDK2 pyruvate dehydrogenase kinase, isozyme 2 5164 ENSG00000005882




WebGestalt is currently developed and maintained by Jing Wang and Bing Zhang at the Zhang Lab. Other people who have made significant contribution to the project include Dexter Duncan, Stefan Kirov, Zhiao Shi, and Jay Snoddy.

Funding credits: NIH/NIAAA (U01 AA016662, U01 AA013512); NIH/NIDA (P01 DA015027); NIH/NIMH (P50 MH078028, P50 MH096972); NIH/NCI (U24 CA159988); NIH/NIGMS (R01 GM088822).